Publications of Dr. William A. Maniatty

By Topic

• Data Mining
  • Distribution based database generation techniques for itemset mining. (IDEAS 2005).
  • Feasible itemset distributions in data mining: theory and application.(PODS 2003).
  • Indexing and data access methods for database mining.(DMKD 2002).
  • Systems support for scalable data mining (SigKDD Explorations 2001)
  • A Requirement Analysis for Parallel KDD Systems(HPDM 2000)
• High Performance Computing and Simulation
  • High-performance computing tools for modeling evolution in epidemics.(HICSS'99).
  • High-performance simulation of evolutionary aspects of epidemics.(PARA98).
  • Parallel computing with generalized cellular automata. (Parallel and Distributed Programming Practices 1998).
  • Impact of memory hierarchy on program partitioning and scheduling.(HICSS94).
  • Tempest: a fast spatially explicit model of ecological dynamics on parallel machines. (International Simulation Conference, 1994).
  • Implementation and Performance of the Parallel Ecological Simulations (Proc. Applications in Parallel and Daistributed Computing, 1994.)
  • Epidemics modeling and simulation on a parallel machine(IASTED 1994).
  • Virtual Epidemics: Ecological Modeling on a Parallel Machine (Mannheim SuParCup 1993).
  • Efficiency of data alignment on MasPar. (SIGPLAN Notices 1993).
• Parallel Algorithms
  • Fine-grain discrete Voronoi diagram algorithms in L₁ and L_∞ norms. (Mathl. Comput. Modelling 1997).
  • Simultaneous parallel reduction. (Parallel Processing Letters, 1995).
• Data Management and File Systems
  • Server Directed File Domain Allocation for Noncontiguous Access(International Workshop on Parallel I/O in Cluster and Grid Computing Systems, 2004)
• Computational Biology (Primarily Epidemiology and Population Dynamics)
  • Spatially structured superinfection and the evolution of virulence (Theoretical Population Biology)
  • Spatial models of selection in RNA worlds: Exploring the origins of life(PPAM 2001).
  • Host spatial heterogeneity and the spread of vector-borne infection (Theoretical Population Biology, 2001).
  • Lyme disease in new york state: spatial pattern at a regional scale. (American Journal of Tropical Medicine and Hygiene, 2001).
  • Population dispersion and equilibrium infection frequency in a spatial epidemic, (Physica D. 1999).
  • Spatial effects and competitive coexistence. (Workshop on Spatioteomporal Models in Biological and Artificial Systems, 1997).
  • Lyme disease: Self-regulation and pathogen invasion. (Journal of Theoretical Biology 1998.)
  • Host spatial heterogeneity and extinction of an SIS epidemics. (Journal of Theoretical Biology 1998.)
• Computing and Information Security
  • A Linux kernel auditing tool for host-based intrusion detection (ACSAC Techblitz 2005)

Refereed Journal Publications

1. T. Caraco, S. Glavanakov, S. Li, W. Maniatty, and B. K. Szymanski. Spatially structured superinfection and the evolution of virulence. Theoretical Population Biology. Accepted for publication.
2. W.A. Maniatty and M.J. Zaki. Systems support for scalable data mining. SIGKDD Explorations, 2(2):56-65, January 2001. In Gzipped Postscript or PDF.
3. T. Caraco, M.C. Duryea, S. Glavanakov, W. Maniatty, and B.K. Szymanski. Host spatial heterogeneity and the spread of vector-borne infection. Theoretical Population Biology, 59:185--206, 2001. In PDF.
4. S. Glavanakov, D.J. White, T. Caraco, A. Lapenis, G.R. Robinson, B.K. Szymanski, and W.A. Maniatty. Lyme disease in new york state: spatial pattern at a regional scale. American Journal of Tropical Medicine and Hygiene, 65:538--545, 2001. In PDF.
5. M. Duryea, J. Gardner, T. Caraco, W. Maniatty, and B. K. Szymanski. Population dispersion and equilibrium infection frequency in a spatial epidemic, Physica D, 132:511--519, 1999.
6. T. Caraco, G. Gardner, W. Maniatty, Deelman E., and B. K. Szymanski. Lyme disease: Self-regulation and pathogen invasion. Journal of Theoretical Biology, 16(193):561--575, August 1998.
7. M. Duryea, J. Gardner, T. Caraco, B. K. Szymanski, and W. A. Maniatty. Host spatial heterogeneity and extinction of an SIS epidemics. Journal of Theoretical Biology, 192:351-361, 1998.
8. W. A. Maniatty, B. K. Szymanski, and T. Caraco. Parallel computing with generalized cellular automata. Parallel and Distributed Programming Practices, 1(1):85-104, January 1998. Also Technical Report 97-3 Department of Computer Science, Rensselaer Polytechnic Institute, Troy, NY 12180. In Gzipped Postscript or PDF.
9. W. A. Maniatty and B. K. Szymanski. Fine-grain discrete Voronoi diagram algorithms in L₁ and L_∞ norms. Mathl. Comput. Modelling, 26(4):71--78, 1997. Also Technical Report 97-6 Department of Computer Science, Rensselaer Polytechnic Institute, Troy, NY 12180. In Gzipped Postscript or PDF.
10. B. K. Szymanski., B. Maniatty and B. Sinharoy Simultaneous parallel reduction. Parallel Processing Letters, 5(3): 437-449, 1995. RPI Dept. of Computer Science Tech Report CS 92-31. In Gzipped Postscript or PDF.

Refereed Conference and Workshop Publications

1. W. A. Maniatty, A. Baykal, V. Aggarwal, J. Brooks, A. Krymer, and S. Maura. A Linux kernel auditing tool for host-based intrusion detection. ACSAC Techblitz 2005, Tucson, AZ, USA, 2005. Accepted.
2. Ganesh Ramesh, William Maniatty, and Mohammed Zaki. Distribution based database generation techniques for itemset mining. In Proceedings of the 9th International Database Engineering & Applications Symposium (IDEAS 2005), pages 307-316, Montreal, CANADA, July 25-27 2005.
3. Bin Jia, Mei-Hwa Chen, and William Maniatty. Server directed file domain allocation for noncontiguous file access. In Proceedings of The 2nd International Workshop on Parallel I/O in Cluster and Grid Computing Systems, Chicago, Illinois, April 19-22 2004. To Appear.
4. G. Ramesh, W. A. Maniatty, and M.J. Zaki. Feasible itemset distributions in data mining: theory and application. In Proceedings of the Twenty-Second ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, pages 284--295, San Diego, CA, USA, June 9-12 2003. PDF
5. G. Ramesh, W. A. Maniatty, and M. J. Zaki. Indexing and data access methods for database mining. In Proceedings of the ACM SIGMOD Workshop on Research Issues in Data Mining and Knowledge Discovery, Madison, Wisconsin, USA., May 2002. ACM (SIGMOD). Also published as a Technical report TR-01-01, Department of Computer Science, University at Albany. In PDF.
6. W. A. Maniatty, T. Caraco, N. Lehman, and B. K. Szymanski. Spatial models of selection in RNA worlds: Exploring the origins of life. In Proceedings of the Fourth International Conference on Parallel Processing and Applied Mathematics (PPAM 2001), Lecture Notes In Computer Science (LNCS), Naleczów, Poland, September 9-12 2001. Springer-Verlag. Part of the Workshop on Complex Systems Simulations. In Gzipped Postcript, or PDF
7. W. A. Maniatty and M. J. Zaki A Requirement Analysis for Parallel KDD Systems In Parallel and Distributed Processing 3rd IPDPS Workshop on High Performance Data Mining. pages 358--365, Cancun, Mexico, May 2000, IEEE. In Gzipped Postcript, or PDF
8. W. A. Maniatty, B. K. Szymanski, and T. Caraco. High-performance computing tools for modeling evolution in epidemics. In Proc. 32nd IEEE Annual Hawaii International Conference on System Sciences, HICSS'99. IEEE, January 1999, CD ROM Disk, 10 Pages (Abstracts pp. 318-319). In Gzipped Postscript or PDF
9. W. A. Maniatty, B. K. Szymanski, and T. Caraco. High-performance simulation of evolutionary aspects of epidemics. In Proceedings of the PARA98 Workshop on Applied Parallel Computing in Large Scale Industrial and Scientific Problems, volume 1541 of Lecture Notes in Computer Science, pages 322--331, Umeåa University, Umeåa Sweden, June 1998. Springer-Verlag. In Gzipped Postscript or PDF
10. T. Caraco, W. Maniatty, and B. K. Szymanski. Spatial effects and competitive coexistence. In F. L. Silva and et al., editors, Proceedings of the Workshop on Spatioteomporal Models in Biological and Artificial Systems, volume~37 of Frontiers in Artificial Intelligence and Applications, pages 9--16, Spatial effects and competitive coexistence. in Biological and Artificial Systems Workshop. Sintra, Portugal, November 1997. IOS Press, Amsterdam. In Gzipped Postscript or PDF
11. W. K. Kaplow, W. Maniatty, and B. K. Szymanski. Impact of memory hierarchy on program partitioning and scheduling. In Proceedings of the 1994 HICSS Conference, vol. II, pages 93-102, Maui, Hawaii, January, 1995. IEEE Computer Society Press, Los Alamitos, CA In PDF
12. W. Maniatty, B.K. Szymanski, and Tom Caraco. Tempest: a fast spatially explicit model of ecological dynamics on parallel machines. In Proceedings of the 1994 International Simulation Conference, pages 114--119, San Diego, CA, 1994. The Society For Computer Simulation. In Gzipped Postscript or PDF
13. W. Maniatty, B.K. Szymanski, and T. Caraco, Implementation and Performance of the Parallel Ecological Simulations, Proc. Applications in Parallel and Daistributed Computing, Caracas, Venezuela, April 1994, IFIP Transactions A-44, C. Girault (ed), North Holland, Amsterdam, 1994, pp. 93-102. In Gzipped Postscript or PDF
14. W. Maniatty, B.K. Szymanski, and T. Caraco. Epidemics modeling and simulation on a parallel machine. In Proceedings of the International Conference on Applied Modelling and Simulation , pages 69--70, Vancouver, Canada, July 1993. IASTED, Calgary, Canada.
15. B. Maniatty, B. Sinharoy. and B. K. Szymanski Efficiency of data alignment on MasPar. SIGPLAN Notices, special issue with Proc. II Workshop on Languages, Compilers, and Run-Time Environments for Distributed Memory Multiprocessors, Boulder, CO, September 1992, 28(1):48--51, 1993. In Gzipped Postscript or PDF.

Miscellaneous Publications

1. W. A. Maniatty. High Performance Computing Tools with Applications to Epidemics and Population Dynamics, PhD. Thesis, Rensselaer Polytechnic Institute, 1998. Winner of the Lester Gerhardt prize for best thesis in science or engineering (1998) and the Robert McNaughton prize for the best thesis in computer science (1997). In Gzipped PostScript or PDF
2. B. Maniatty, B. Szymanski and T. Caraco. Virtual Epidemics: Ecological Modeling on a Parallel Machine, This entry won the Student prize in the Mannheim SuParCup 1993, Mannheim Germany, 1992 (not published). In Gzipped PostScript or PDF